Ok, so I figured out how to make server mods for Minecraft in its current state. Before, I was running into a problem with capturing stderr in Java from Java, so I just went and read up on some Python tutorials and yeah. That's my second programming language learned this week (Ruby for easy regex*), lol. What does this mean? For any of you hosters, just request stuff and I can make them for you. :D
*Google it. You'll most likely be mindforgeted if you haven't seen them before.